File System Consistency Check Tool

You can manually check the file system by using the file system consistency check tool, fsck, after you unmount the file system.

The Photon OS file system includes btrfs and ext4. The default root file system is ext4, which you can see by looking at the file system configuration file, /etc/fstab:

cat /etc/fstab
    #system mnt-pt  type    options dump    fsck
    /dev/sda1       /       ext4    defaults,barrier,noatime,noacl,data=ordered     1       1
    /dev/cdrom      /mnt/cdrom      iso9660 ro,noauto       0       0

The 1 in the fifth column, under fsck, indicates that fsck checks the file system when the system boots.

You can also perform a read-only check without unmounting it:

fsck -nf /dev/sda1
    fsck from util-linux 2.27.1
    e2fsck 1.42.13 (17-May-2015)
    Warning!  /dev/sda1 is mounted.
    Warning: skipping journal recovery because doing a read-only filesystem check.
    Pass 1: Checking inodes, blocks, and sizes
    Pass 2: Checking directory structure
    Pass 3: Checking directory connectivity
    Pass 4: Checking reference counts
    Pass 5: Checking group summary information
    Free blocks count wrong (1439651, counted=1423942).
    Fix? no
    Free inodes count wrong (428404, counted=428397).
    Fix? no
    /dev/sda1: 95884/524288 files (0.3% non-contiguous), 656477/2096128 blocks

The inodes count might be wrong because the file system is mounted and in use.

To fix errors, you must first unmount the file system and then run fsck again:

umount /dev/sda1
umount: /: target is busy

You can find information about processes that use the device by using lsof or fuser.

lsof | grep ^jbd2/sd
    jbd2/sda1   99                root  cwd       DIR                8,1     4096          2 /
    jbd2/sda1   99                root  rtd       DIR                8,1     4096          2 /
    jbd2/sda1   99                root  txt   unknown                                        /proc/99/exe

The above example indicates that file system is in use.

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